PERMANOVA
Permutational MANOVA

Resemblance worksheet
Name: Actiniaria Neck
Data type: Similarity
Selection: All
Resemblance: S17 Bray Curtis similarity (+d)

Sums of squares type: Type III (partial)
Fixed effects sum to zero for mixed terms
Permutation method: Permutation of residuals under a reduced model
Number of permutations: 9999

Factors
Name	Abbrev.	Type	Levels
Period	Pe	Fixed	     3
Treatment	Tr	Fixed	     2

PERMANOVA table of results
	  	      	      	         	       	Unique
Source	df	    SS	    MS	 Pseudo-F	P(perm)	 perms
Pe	 2	35.132	17.566	  0.25434	 0.7778	  9949
Tr	 1	869.04	869.04	   12.583	 0.0023	  9873
PexTr	 2	 7.859	3.9295	5.6894E-2	 0.9517	  9944
Res	29	2002.9	69.067	         	       	      
Total	34	2939.1	      	         	       	      

Details of the expected mean squares (EMS) for the model
Source	EMS
Pe	1*V(Res) + 8.9082*S(Pe)
Tr	1*V(Res) + 13.361*S(Tr)
PexTr	1*V(Res) + 4.4541*S(PexTr)
Res	1*V(Res)

Construction of Pseudo-F ratio(s) from mean squares
Source	Numerator	Denominator	Num.df	Den.df
Pe	1*Pe	1*Res	     2	    29
Tr	1*Tr	1*Res	     1	    29
PexTr	1*PexTr	1*Res	     2	    29

Estimates of components of variation
Source	Estimate	Sq.root
S(Pe)	 -5.7813	-2.4044
S(Tr)	  59.875	 7.7379
S(PexTr)	 -14.624	-3.8242
V(Res)	  69.067	 8.3106