PERMANOVA
Permutational MANOVA

Resemblance worksheet
Name: Pleuro Slope
Data type: Similarity
Selection: All
Resemblance: S17 Bray Curtis similarity (+d)

Sums of squares type: Type III (partial)
Fixed effects sum to zero for mixed terms
Permutation method: Permutation of residuals under a reduced model
Number of permutations: 9999

Factors
Name	Abbrev.	Type	Levels
Period	Pe	Fixed	     3
Treatment	Tr	Fixed	     2

PERMANOVA table of results
	  	      	      	         	       	Unique
Source	df	    SS	    MS	 Pseudo-F	P(perm)	 perms
Pe	 2	447.56	223.78	   3.7928	 0.0318	  9954
Tr	 1	2.0355	2.0355	3.4499E-2	 0.8629	  9900
PexTr	 2	336.59	 168.3	   2.8524	  0.072	  9948
Res	30	  1770	    59	         	       	      
Total	35	2306.6	      	         	       	      

Details of the expected mean squares (EMS) for the model
Source	EMS
Pe	1*V(Res) + 9*S(Pe)
Tr	1*V(Res) + 13.5*S(Tr)
PexTr	1*V(Res) + 4.5*S(PexTr)
Res	1*V(Res)

Construction of Pseudo-F ratio(s) from mean squares
Source	Numerator	Denominator	Num.df	Den.df
Pe	1*Pe	1*Res	     2	    30
Tr	1*Tr	1*Res	     1	    30
PexTr	1*PexTr	1*Res	     2	    30

Estimates of components of variation
Source	Estimate	Sq.root
S(Pe)	  18.309	 4.2789
S(Tr)	 -4.2196	-2.0542
S(PexTr)	  24.288	 4.9283
V(Res)	      59	 7.6812