PERMANOVA
Permutational MANOVA

Resemblance worksheet
Name: Resem52
Data type: Similarity
Selection: All
Resemblance: S17 Bray Curtis similarity (+d)

Sums of squares type: Type III (partial)
Fixed effects sum to zero for mixed terms
Permutation method: Permutation of residuals under a reduced model
Number of permutations: 9999

Factors
Name	Abbrev.	Type	Levels
Treatment	Tr	Fixed	     2
Period	Pe	Fixed	     3

PERMANOVA table of results
	  	      	      	        	       	Unique
Source	df	    SS	    MS	Pseudo-F	P(perm)	 perms
Tr	 1	1.7081	1.7081	 0.29897	 0.6257	  9788
Pe	 2	3.4342	1.7171	 0.30054	 0.6861	  9921
TrxPe	 2	3.4342	1.7171	 0.30054	 0.6792	  9926
Res	29	165.69	5.7133	        	       	      
Total	34	181.07	      	        	       	      

Details of the expected mean squares (EMS) for the model
Source	EMS
Tr	1*V(Res) + 13.361*S(Tr)
Pe	1*V(Res) + 8.9082*S(Pe)
TrxPe	1*V(Res) + 4.4541*S(TrxPe)
Res	1*V(Res)

Construction of Pseudo-F ratio(s) from mean squares
Source	Numerator	Denominator	Num.df	Den.df
Tr	1*Tr	1*Res	     1	    29
Pe	1*Pe	1*Res	     2	    29
TrxPe	1*TrxPe	1*Res	     2	    29

Estimates of components of variation
Source	Estimate	 Sq.root
S(Tr)	-0.29977	-0.54751
S(Pe)	 -0.4486	-0.66978
S(TrxPe)	 -0.8972	-0.94721
V(Res)	  5.7133	  2.3903