PERMANOVA
Permutational MANOVA

Resemblance worksheet
Name: Resem12
Data type: Similarity
Selection: All
Transform: Fourth root
Resemblance: S17 Bray Curtis similarity (+d)

Sums of squares type: Type III (partial)
Fixed effects sum to zero for mixed terms
Permutation method: Permutation of residuals under a reduced model
Number of permutations: 9999

Factors
Name	Abbrev.	Type	Levels
Period	Pe	Fixed	     3
Treatment	Tr	Fixed	     2

PERMANOVA table of results
	  	      	      	        	       	Unique
Source	df	    SS	    MS	Pseudo-F	P(perm)	 perms
Pe	 2	1622.4	811.22	  2.4728	 0.0934	  9957
Tr	 1	1528.4	1528.4	  4.6589	 0.0346	  9889
PexTr	 2	385.82	192.91	 0.58804	 0.5631	  9948
Res	56	 18371	328.06	        	       	      
Total	61	 21595	      	        	       	      

Details of the expected mean squares (EMS) for the model
Source	EMS
Pe	1*V(Res) + 15.15*S(Pe)
Tr	1*V(Res) + 22.723*S(Tr)
PexTr	1*V(Res) + 7.575*S(PexTr)
Res	1*V(Res)

Construction of Pseudo-F ratio(s) from mean squares
Source	Numerator	Denominator	Num.df	Den.df
Pe	1*Pe	1*Res	     2	    56
Tr	1*Tr	1*Res	     1	    56
PexTr	1*PexTr	1*Res	     2	    56

Estimates of components of variation
Source	Estimate	Sq.root
S(Pe)	  31.892	 5.6473
S(Tr)	  52.826	 7.2681
S(PexTr)	 -17.841	-4.2239
V(Res)	  328.06	 18.112