PERMANOVA
Permutational MANOVA

Resemblance worksheet
Name: Resem17
Data type: Similarity
Selection: All
Transform: Fourth root
Resemblance: S17 Bray Curtis similarity (+d)

Sums of squares type: Type III (partial)
Fixed effects sum to zero for mixed terms
Permutation method: Permutation of residuals under a reduced model
Number of permutations: 9999

Factors
Name	Abbrev.	Type	Levels
Period	Pe	Fixed	     3
Treatment	Tr	Fixed	     2

PERMANOVA table of results
	  	      	      	         	       	Unique
Source	df	    SS	    MS	 Pseudo-F	P(perm)	 perms
Pe	 2	28.693	14.346	4.1264E-2	 0.9789	  9946
Tr	 1	3034.8	3034.8	   8.7288	 0.0041	  9924
PexTr	 2	 442.5	221.25	  0.63636	 0.5512	  9957
Res	51	 17732	347.68	         	       	      
Total	56	 21790	      	         	       	      

Details of the expected mean squares (EMS) for the model
Source	EMS
Pe	1*V(Res) + 11.786*S(Pe)
Tr	1*V(Res) + 16.364*S(Tr)
PexTr	1*V(Res) + 5.8929*S(PexTr)
Res	1*V(Res)

Construction of Pseudo-F ratio(s) from mean squares
Source	Numerator	Denominator	Num.df	Den.df
Pe	1*Pe	1*Res	     2	    51
Tr	1*Tr	1*Res	     1	    51
PexTr	1*PexTr	1*Res	     2	    51

Estimates of components of variation
Source	Estimate	Sq.root
S(Pe)	 -28.283	-5.3181
S(Tr)	  164.21	 12.815
S(PexTr)	 -21.455	-4.6319
V(Res)	  347.68	 18.646