\section{File List}
Here is a list of all files with brief descriptions\-:\begin{DoxyCompactList}
\item\contentsline{section}{\hyperlink{alphaCodeAddition_8cpp}{alpha\-Code\-Addition.\-cpp} }{\pageref{alphaCodeAddition_8cpp}}{}
\item\contentsline{section}{\hyperlink{ColorHelper_8cpp}{Color\-Helper.\-cpp} }{\pageref{ColorHelper_8cpp}}{}
\item\contentsline{section}{\hyperlink{ColorHelper_8h}{Color\-Helper.\-h} }{\pageref{ColorHelper_8h}}{}
\item\contentsline{section}{\hyperlink{ColorHelper_8hpp}{Color\-Helper.\-hpp} }{\pageref{ColorHelper_8hpp}}{}
\item\contentsline{section}{\hyperlink{genFilterDefs_8h}{gen\-Filter\-Defs.\-h} }{\pageref{genFilterDefs_8h}}{}
\item\contentsline{section}{\hyperlink{GlutWindow_8cpp}{Glut\-Window.\-cpp} }{\pageref{GlutWindow_8cpp}}{}
\item\contentsline{section}{\hyperlink{GlutWindow_8h}{Glut\-Window.\-h} }{\pageref{GlutWindow_8h}}{}
\item\contentsline{section}{\hyperlink{GlutWindow2d_8cpp}{Glut\-Window2d.\-cpp} }{\pageref{GlutWindow2d_8cpp}}{}
\item\contentsline{section}{\hyperlink{GlutWindow2d_8h}{Glut\-Window2d.\-h} }{\pageref{GlutWindow2d_8h}}{}
\item\contentsline{section}{\hyperlink{main_8cpp}{main.\-cpp} }{\pageref{main_8cpp}}{}
\item\contentsline{section}{\hyperlink{mainLinux_8cpp}{main\-Linux.\-cpp} }{\pageref{mainLinux_8cpp}}{}
\item\contentsline{section}{\hyperlink{mainMbari_8cpp}{main\-Mbari.\-cpp} }{\pageref{mainMbari_8cpp}}{}
\item\contentsline{section}{\hyperlink{mapio_8cpp}{mapio.\-cpp} }{\pageref{mapio_8cpp}}{}
\item\contentsline{section}{\hyperlink{mapio_8h}{mapio.\-h} }{\pageref{mapio_8h}}{}
\item\contentsline{section}{\hyperlink{matrixArrayCalcs_8cpp}{matrix\-Array\-Calcs.\-cpp} }{\pageref{matrixArrayCalcs_8cpp}}{}
\item\contentsline{section}{\hyperlink{matrixArrayCalcs_8h}{matrix\-Array\-Calcs.\-h} \\*Matrix\-Array\-Calcs defines various utility functions for use with Matrix objects and array objects }{\pageref{matrixArrayCalcs_8h}}{}
\item\contentsline{section}{\hyperlink{myOutput_8cpp}{my\-Output.\-cpp} }{\pageref{myOutput_8cpp}}{}
\item\contentsline{section}{\hyperlink{myOutput_8h}{my\-Output.\-h} }{\pageref{myOutput_8h}}{}
\item\contentsline{section}{\hyperlink{Octree_8cpp}{Octree.\-cpp} }{\pageref{Octree_8cpp}}{}
\item\contentsline{section}{\hyperlink{Octree_8hpp}{Octree.\-hpp} }{\pageref{Octree_8hpp}}{}
\item\contentsline{section}{\hyperlink{octreeDefs_8h}{octree\-Defs.\-h} }{\pageref{octreeDefs_8h}}{}
\item\contentsline{section}{\hyperlink{OctreeNode_8cpp}{Octree\-Node.\-cpp} }{\pageref{OctreeNode_8cpp}}{}
\item\contentsline{section}{\hyperlink{OctreeSupport_8cpp}{Octree\-Support.\-cpp} }{\pageref{OctreeSupport_8cpp}}{}
\item\contentsline{section}{\hyperlink{OctreeSupport_8hpp}{Octree\-Support.\-hpp} }{\pageref{OctreeSupport_8hpp}}{}
\item\contentsline{section}{\hyperlink{OctreeTestCode_8h}{Octree\-Test\-Code.\-h} }{\pageref{OctreeTestCode_8h}}{}
\item\contentsline{section}{\hyperlink{particleFilterDefs_8h}{particle\-Filter\-Defs.\-h} }{\pageref{particleFilterDefs_8h}}{}
\item\contentsline{section}{\hyperlink{ParticlePlot_8cpp}{Particle\-Plot.\-cpp} }{\pageref{ParticlePlot_8cpp}}{}
\item\contentsline{section}{\hyperlink{ParticlePlot_8h}{Particle\-Plot.\-h} }{\pageref{ParticlePlot_8h}}{}
\item\contentsline{section}{\hyperlink{structDefs_8c_09_09}{struct\-Defs.\-c++} }{\pageref{structDefs_8c_09_09}}{}
\item\contentsline{section}{\hyperlink{structDefs_8cpp}{struct\-Defs.\-cpp} }{\pageref{structDefs_8cpp}}{}
\item\contentsline{section}{\hyperlink{structDefs_8h}{struct\-Defs.\-h} }{\pageref{structDefs_8h}}{}
\item\contentsline{section}{\hyperlink{structDefs_8h_09_09}{struct\-Defs.\-h++} }{\pageref{structDefs_8h_09_09}}{}
\item\contentsline{section}{\hyperlink{structDefsOrig_8cpp}{struct\-Defs\-Orig.\-cpp} }{\pageref{structDefsOrig_8cpp}}{}
\item\contentsline{section}{\hyperlink{TerrainAidLog_8cc}{Terrain\-Aid\-Log.\-cc} }{\pageref{TerrainAidLog_8cc}}{}
\item\contentsline{section}{\hyperlink{TerrainAidLog_8h}{Terrain\-Aid\-Log.\-h} }{\pageref{TerrainAidLog_8h}}{}
\item\contentsline{section}{\hyperlink{TerrainMap_8cpp}{Terrain\-Map.\-cpp} }{\pageref{TerrainMap_8cpp}}{}
\item\contentsline{section}{\hyperlink{TerrainMap_8h}{Terrain\-Map.\-h} }{\pageref{TerrainMap_8h}}{}
\item\contentsline{section}{\hyperlink{TerrainMapDEM_8cpp}{Terrain\-Map\-D\-E\-M.\-cpp} }{\pageref{TerrainMapDEM_8cpp}}{}
\item\contentsline{section}{\hyperlink{TerrainMapDEM_8h}{Terrain\-Map\-D\-E\-M.\-h} }{\pageref{TerrainMapDEM_8h}}{}
\item\contentsline{section}{\hyperlink{TerrainMapOctree_8cpp}{Terrain\-Map\-Octree.\-cpp} }{\pageref{TerrainMapOctree_8cpp}}{}
\item\contentsline{section}{\hyperlink{TerrainMapOctree_8h}{Terrain\-Map\-Octree.\-h} }{\pageref{TerrainMapOctree_8h}}{}
\item\contentsline{section}{\hyperlink{TerrainNav_8cpp}{Terrain\-Nav.\-cpp} }{\pageref{TerrainNav_8cpp}}{}
\item\contentsline{section}{\hyperlink{TerrainNav_8h}{Terrain\-Nav.\-h} }{\pageref{TerrainNav_8h}}{}
\item\contentsline{section}{\hyperlink{TerrainNavClient_8cpp}{Terrain\-Nav\-Client.\-cpp} }{\pageref{TerrainNavClient_8cpp}}{}
\item\contentsline{section}{\hyperlink{TerrainNavClient_8h}{Terrain\-Nav\-Client.\-h} }{\pageref{TerrainNavClient_8h}}{}
\item\contentsline{section}{\hyperlink{testStructDefs_8cpp}{test\-Struct\-Defs.\-cpp} }{\pageref{testStructDefs_8cpp}}{}
\item\contentsline{section}{\hyperlink{TNavExtendKalmanFilter_8cpp}{T\-Nav\-Extend\-Kalman\-Filter.\-cpp} }{\pageref{TNavExtendKalmanFilter_8cpp}}{}
\item\contentsline{section}{\hyperlink{TNavExtendKalmanFilter_8h}{T\-Nav\-Extend\-Kalman\-Filter.\-h} }{\pageref{TNavExtendKalmanFilter_8h}}{}
\item\contentsline{section}{\hyperlink{TNavFilter_8cpp}{T\-Nav\-Filter.\-cpp} }{\pageref{TNavFilter_8cpp}}{}
\item\contentsline{section}{\hyperlink{TNavFilter_8h}{T\-Nav\-Filter.\-h} }{\pageref{TNavFilter_8h}}{}
\item\contentsline{section}{\hyperlink{TNavParticleFilter_8cpp}{T\-Nav\-Particle\-Filter.\-cpp} }{\pageref{TNavParticleFilter_8cpp}}{}
\item\contentsline{section}{\hyperlink{TNavParticleFilter_8h}{T\-Nav\-Particle\-Filter.\-h} }{\pageref{TNavParticleFilter_8h}}{}
\item\contentsline{section}{\hyperlink{TNavPointMassFilter_8cpp}{T\-Nav\-Point\-Mass\-Filter.\-cpp} }{\pageref{TNavPointMassFilter_8cpp}}{}
\item\contentsline{section}{\hyperlink{TNavPointMassFilter_8h}{T\-Nav\-Point\-Mass\-Filter.\-h} }{\pageref{TNavPointMassFilter_8h}}{}
\item\contentsline{section}{\hyperlink{TNavSigmaPointFilter_8cpp}{T\-Nav\-Sigma\-Point\-Filter.\-cpp} }{\pageref{TNavSigmaPointFilter_8cpp}}{}
\item\contentsline{section}{\hyperlink{TNavSigmaPointFilter_8h}{T\-Nav\-Sigma\-Point\-Filter.\-h} }{\pageref{TNavSigmaPointFilter_8h}}{}
\item\contentsline{section}{\hyperlink{trn__server_8cpp}{trn\-\_\-server.\-cpp} }{\pageref{trn__server_8cpp}}{}
\end{DoxyCompactList}